Entropic Trust Region Packing Algorithm v2 – Version of the algorithm used in Densest plane group packings of regular polygons. Includes implementation and improved efficiency of the overlap constraint evaluation computations for regular convex polygons in all 17 plane groups. Source files: ETRPA.zip
Transfer entropy significance calculator v2 – optimized version of Transfer entropy significance calculator including pairwise transfer entropy calculation of a network. Source file: py
Transfer entropy significance calculator – implements permutation test of transfer entropy. Source file: py
ESN Toolbox – implementation of Kraskov-Stoegbauer-Grassberger algorithm for calculating Transfer entropy and Active information storage; Memory capacity of a network and Lyapunov exponent computation; Ragwitz-Kantz embedding criterion; Kozachenko – Leonenko differential entropy estimator in python. Source file: py
Two Sample t-test – Python script implementing two sample t-test, including p-value, statistical power and required approximate sample size for type I. error of 0.05 and type II. error of 0.1. Source file: py
Mersenne twister – 16-bit version of Mersenne twister written in R including the Diehard Squeeze test. Source file:R
Hidden Markov expert (ESN) model – Hidden Markov Experts using Echo State Networks for time-series prediction implemented in R. Source file: R . Data: ZW
Hopfield network – Python implementation of a Hopfield network as auto-associative memory. Source files: zip
Multilayer perceptron – Python implementation of a multilayer perceptron. Source files: zip
Self-organizing map – Python implementation of self-organazing maps including U-matrix computation. Source files: zip
Total least squares – Matlab implementation of total least squares. Source file: m
Cubic hermite spline – Matlab implementation of Hermit polynomials and its application in computing splines. Source files: zip
Fund – a simple JAVA application including GUI and a database written in MongoDb. Source files: zip